# ------------------------------------------------ # CITATION.cff file created with {cffr} R package # See also: https://docs.ropensci.org/cffr/ # ------------------------------------------------ cff-version: 1.2.0 message: 'To cite package "genevintage" in publications use:' type: software license: MIT title: 'genevintage: Detect Annotation Releases and Repair Gene Names' version: 0.1.3 doi: 10.32614/CRAN.package.genevintage abstract: Detects the species and the 'Ensembl' or 'GENCODE' annotation release associated with a set of gene or transcript identifiers by scoring them against a bundled fingerprint of each release. Identifiers are then converted to gene names using the matching release. Gene symbols that spreadsheet software turned into dates or numbers ('SEPT9' to '9-Sep') are restored to the spelling of the chosen release. Also retrieves genes by class (mitochondrial, sex-linked, protein-coding, ribosomal, transfer RNA, long non-coding RNA), exon-union gene lengths, 'Entrez' cross-references, and orthologs in another species from 'Ensembl Compara'. authors: - family-names: Choudhary given-names: Saket email: saketc@iitb.ac.in orcid: https://orcid.org/0000-0001-5202-7633 repository: https://saketlab.r-universe.dev repository-code: https://github.com/saketlab/genevintage commit: 1a48da0faf6494418142bfa94f6188cae3fc1ea6 url: https://genevintage.saketlab.org/R/ date-released: '2026-10-08' contact: - family-names: Choudhary given-names: Saket email: saketc@iitb.ac.in orcid: https://orcid.org/0000-0001-5202-7633